MotionCor2 1.4.7-GCCcore-10.3.0-CUDA-11.3.1
MotionCor2 correct anisotropic image motion at the single pixel level across the whole frame, suitable for both single particle and tomographic images. Iterative, patch-based motion detection is combined with spatial and temporal constraints and dose weighting. Cite publication: Shawn Q. Zheng, Eugene Palovcak, Jean-Paul Armache, Yifan Cheng and David A. Agard (2016) Anisotropic Correction of Beam-induced Motion for Improved Single-particle Electron Cryo-microscopy, Nature Methods, submitted. BioArxiv: https://biorxiv.org/content/early/2016/07/04/061960Accessing MotionCor2 1.4.7-GCCcore-10.3.0-CUDA-11.3.1
To load the module for MotionCor2 1.4.7-GCCcore-10.3.0-CUDA-11.3.1 please use this command on Baskerville:
📋
module load bask-apps/live
module load MotionCor2/1.4.7-GCCcore-10.3.0-CUDA-11.3.1
Bask Apps Env
More Information
For more information visit the MotionCor2 website.
Dependencies
This version of MotionCor2 has a direct dependency on: CUDA/11.3.1 GCCcore/10.3.0 libjpeg-turbo/2.0.6-GCCcore-10.3.0 LibTIFF/4.2.0-GCCcore-10.3.0 zlib/1.2.11-GCCcore-10.3.0
Required By
This version of MotionCor2 is a direct dependent of: RELION/4.0.0-foss-2021a-CUDA-11.3.1 RELION/4.0.1-foss-2021a-CUDA-11.3.1
Other Versions
These versions of MotionCor2 are available on Baskerville. These will be retained in accordance with our Applications Support and Retention Policy.
| Version | Bask Apps Env |
|---|---|
| 1.4.2-GCCcore-10.2.0 | live |
| 1.4.2-GCCcore-10.2.0 | test |
Last modified on 18th January 2023