RELION b5.0.0.20240827.12cf15d-foss-2023a-CUDA-12.1.1
There is a newer install of RELION
RELION (for REgularised LIkelihood OptimisatioN, pronounce rely-on) is a stand-alone computer program that employs an empirical Bayesian approach to refinement of (multiple) 3D reconstructions or 2D class averages in electron cryo-microscopy (cryo-EM).Accessing RELION b5.0.0.20240827.12cf15d-foss-2023a-CUDA-12.1.1
To load the module for RELION b5.0.0.20240827.12cf15d-foss-2023a-CUDA-12.1.1 please use this command on Baskerville:
📋
module load bask-apps/live
module load RELION/b5.0.0.20240827.12cf15d-foss-2023a-CUDA-12.1.1
Bask Apps Env
Extensions
- morphosamplers 0.0.14
- yet_another_imod_wrapper 0.1.1
More Information
For more information visit the RELION website.
Dependencies
This version of RELION has a direct dependency on: ctffind/4.1.14-foss-2023a CUDA/12.1.1 DynaMight/0.0.0.20240319.eef4aa6-foss-2023a-CUDA-12.1.1 einops/0.7.0-GCCcore-12.3.0 FLTK/1.3.8-GCCcore-12.3.0 foss/2023a Ghostscript/10.01.2-GCCcore-12.3.0 LibTIFF/4.5.0-GCCcore-12.3.0 lil-aretomo/0.1.0-foss-2023a lru-dict/1.3.0-GCCcore-12.3.0 makefun/1.15.2-GCCcore-12.3.0 mdocfile/0.1.2-foss-2023a MotionCor2/1.6.4-GCCcore-12.3.0 mrcfile/1.5.0-foss-2023a Python/3.11.3-GCCcore-12.3.0 relion-blush/0.0.1.20240529.7889199-foss-2023a-CUDA-12.1.1 relion-classranker/0.0.1.20230822.b6e751e-foss-2023a-CUDA-12.1.1 ResMap/1.1.4 SciPy-bundle/2023.07-gfbf-2023a starfile/0.5.6-foss-2023a topaz/0.2.5.20231120-foss-2023a-CUDA-12.1.1 X11/20230603-GCCcore-12.3.0 xpdf/4.05-GCCcore-12.3.0
Other Versions
These versions of RELION are available on Baskerville. These will be retained in accordance with our Applications Support and Retention Policy.
| Version | Bask Apps Env |
|---|---|
| 4.0.1-foss-2021a-CUDA-11.3.1 | live |
| 4.0.0-foss-2021a-CUDA-11.3.1 | live |
| 3.1.3-fosscuda-2020b | live |
| 3.1.3-fosscuda-2020b | test |
Last modified on 25th October 2024