foss 2023a

GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.

Accessing foss 2023a

To load the module for foss 2023a please use this command on Baskerville:

📋 module load bask-apps/live module load foss/2023a

Bask Apps Env

More Information

For more information visit the foss website.

Dependencies

This version of foss has a direct dependency on: FFTW/3.3.10-GCC-12.3.0 FFTW.MPI/3.3.10-gompi-2023a FlexiBLAS/3.3.1-GCC-12.3.0 GCC/12.3.0 OpenMPI/4.1.5-GCC-12.3.0 ScaLAPACK/2.2.0-gompi-2023a-fb

Required By

This version of foss is a direct dependent of: Biopython/1.83-foss-2023a bokeh/3.2.2-foss-2023a build/1.0.3-foss-2023a ctffind/4.1.14-foss-2023a CuPy/13.0.0-foss-2023a-CUDA-12.3.0 dask/2023.9.2-foss-2023a DynaMight/0.0.0.20240319.eef4aa6-foss-2023a-CUDA-12.1.1 Faiss/1.7.4-foss-2023a-CUDA-12.1.1 h5py/3.9.0-foss-2023a librosa/0.10.1-foss-2023a lil-aretomo/0.1.0-foss-2023a magma/2.7.2-foss-2023a-CUDA-12.1.1 mdocfile/0.1.2-foss-2023a mrcfile/1.5.0-foss-2023a napari/0.4.18-foss-2023a NLTK/3.8.1-foss-2023a numba/0.58.1-foss-2023a PyTorch/2.1.2-foss-2023a-CUDA-12.1.1 PyTorch-bundle/2.1.2-foss-2023a-CUDA-12.1.1 PyTorch-Geometric/2.5.0-foss-2023a-PyTorch-2.1.2-CUDA-12.1.1 RELION/b5.0.0.20240827.12cf15d-foss-2023a-CUDA-12.1.1 relion-blush/0.0.1.20240529.7889199-foss-2023a-CUDA-12.1.1 relion-classranker/0.0.1.20230822.b6e751e-foss-2023a-CUDA-12.1.1 scikit-image/0.22.0-foss-2023a starfile/0.5.6-foss-2023a topaz/0.2.5.20231120-foss-2023a-CUDA-12.1.1 torchvision/0.16.0-foss-2023a-CUDA-12.1.1 tsne-cuda/3.0.1-foss-2023a-CUDA-12.1.1 umap-learn/0.5.5-foss-2023a

Other Versions

These versions of foss are available on Baskerville. These will be retained in accordance with our Applications Support and Retention Policy.

Version	Bask Apps Env
2022b	live
2022a	live
2021.04	test
2021a	live
2021a	test

Last modified on 25th March 2024