mrcfile 1.5.0-foss-2023a

mrcfile is a Python implementation of the MRC2014 file format, which is used in structural biology to store image and volume data. It allows MRC files to be created and opened easily using a very simple API, which exposes the file’s header and data as numpy arrays. The code runs in Python 2 and 3 and is fully unit-tested. This library aims to allow users and developers to read and write standard- compliant MRC files in Python as easily as possible, and with no dependencies on any compiled libraries except numpy. You can use it interactively to inspect files, correct headers and so on, or in scripts and larger software packages to provide basic MRC file I/O functions.

Accessing mrcfile 1.5.0-foss-2023a

To load the module for mrcfile 1.5.0-foss-2023a please use this command on Baskerville:

📋 module load bask-apps/live
module load mrcfile/1.5.0-foss-2023a

Bask Apps Env

live

More Information

For more information visit the mrcfile website.

Dependencies

This version of mrcfile has a direct dependency on: foss/2023a Python/3.11.3-GCCcore-12.3.0 SciPy-bundle/2023.07-gfbf-2023a

Required By

This version of mrcfile is a direct dependent of: DynaMight/0.0.0.20240319.eef4aa6-foss-2023a-CUDA-12.1.1 lil-aretomo/0.1.0-foss-2023a RELION/b5.0.0.20240827.12cf15d-foss-2023a-CUDA-12.1.1 relion-blush/0.0.1.20240529.7889199-foss-2023a-CUDA-12.1.1

Other Versions

These versions of mrcfile are available on Baskerville. These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 17th October 2024