NiBabel 3.2.1-foss-2021a

There is a newer install of NiBabel

NiBabel provides read/write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2 and later), GIFTI, NIfTI1, NIfTI2, MINC1, MINC2, MGH and ECAT as well as Philips PAR/REC. We can read and write Freesurfer geometry, and read Freesurfer morphometry and annotation files. There is some very limited support for DICOM. NiBabel is the successor of PyNIfTI.

Accessing NiBabel 3.2.1-foss-2021a

To load the module for NiBabel 3.2.1-foss-2021a please use this command on Baskerville:

📋 module load bask-apps/live
module load NiBabel/3.2.1-foss-2021a

Bask Apps Env

live

Extensions

• bz2file 0.98
• nibabel 3.2.1

More Information

For more information visit the NiBabel website.

Dependencies

This version of NiBabel has a direct dependency on: foss/2021a Pillow/8.2.0-GCCcore-10.3.0 pydicom/2.2.2-GCCcore-10.3.0 Python/3.9.5-GCCcore-10.3.0 SciPy-bundle/2021.05-foss-2021a

Required By

This version of NiBabel is a direct dependent of: MNE-Python/0.24.1-foss-2021a osl-dynamics/1.2.0-foss-2021a-CUDA-11.3.1

Other Versions

These versions of NiBabel are available on Baskerville. These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 27th March 2023