NiBabel 4.0.2-foss-2022a

NiBabel provides read/write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2 and later), GIFTI, NIfTI1, NIfTI2, MINC1, MINC2, MGH and ECAT as well as Philips PAR/REC. We can read and write Freesurfer geometry, and read Freesurfer morphometry and annotation files. There is some very limited support for DICOM. NiBabel is the successor of PyNIfTI.

Accessing NiBabel 4.0.2-foss-2022a

To load the module for NiBabel 4.0.2-foss-2022a please use this command on Baskerville:

📋 module load bask-apps/live
module load NiBabel/4.0.2-foss-2022a

Bask Apps Env

live

Extensions

• bz2file 0.98
• nibabel 4.0.2

More Information

For more information visit the NiBabel website.

Dependencies

This version of NiBabel has a direct dependency on: foss/2022a Pillow/9.1.1-GCCcore-11.3.0 pydicom/2.3.0-GCCcore-11.3.0 Python/3.10.4-GCCcore-11.3.0 SciPy-bundle/2022.05-foss-2022a

Required By

This version of NiBabel is a direct dependent of: MONAI/1.2.0-foss-2022a-CUDA-11.7.0

Other Versions

These versions of NiBabel are available on Baskerville. These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 7th August 2023